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| -rw-r--r-- | src/content/en/blog/2020/08/31/database-i-wish-i-had.adoc | 299 |
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diff --git a/src/content/en/blog/2020/08/10/guix-srht.adoc b/src/content/en/blog/2020/08/10/guix-srht.adoc new file mode 100644 index 0000000..a89e86e --- /dev/null +++ b/src/content/en/blog/2020/08/10/guix-srht.adoc @@ -0,0 +1,128 @@ += Guix inside sourcehut builds.sr.ht CI +:updatedat: 2020-08-19 + +:nixos: https://man.sr.ht/builds.sr.ht/compatibility.md#nixos +:guix: https://guix.gnu.org/ +:binary-inst: https://guix.gnu.org/manual/en/guix.html#Binary-Installation +:shell-inst: https://git.savannah.gnu.org/cgit/guix.git/plain/etc/guix-install.sh + +After the release of the {nixos}[NixOS images in builds.sr.ht] and much usage of +it, I also started looking at {guix}[Guix] and wondered if I could get it on the +awesome builds.sr.ht service. + +The Guix manual section on the {binary-inst}[binary installation] is very +thorough, and even a {shell-inst}[shell installer script] is provided, but it is +built towards someone installing Guix on their personal computer, and relies +heavily on interactive input. + +I developed the following set of scripts that I have been using for some time to +run Guix tasks inside builds.sr.ht jobs. First, `install-guix.sh`: + +[source,sh] +---- +#!/usr/bin/env bash +set -x +set -Eeuo pipefail + +VERSION='1.0.1' +SYSTEM='x86_64-linux' +BINARY="guix-binary-${VERSION}.${SYSTEM}.tar.xz" + +cd /tmp +wget "https://ftp.gnu.org/gnu/guix/${BINARY}" +tar -xf "${BINARY}" + +sudo mv var/guix /var/ +sudo mv gnu / +sudo mkdir -p ~root/.config/guix +sudo ln -fs /var/guix/profiles/per-user/root/current-guix ~root/.config/guix/current + +GUIX_PROFILE="$(echo ~root)/.config/guix/current" +source "${GUIX_PROFILE}/etc/profile" + +groupadd --system guixbuild +for i in $(seq -w 1 10); +do + useradd -g guixbuild \ + -G guixbuild \ + -d /var/empty \ + -s "$(command -v nologin)" \ + -c "Guix build user ${i}" --system \ + "guixbuilder${i}"; +done + +mkdir -p /usr/local/bin +cd /usr/local/bin +ln -s /var/guix/profiles/per-user/root/current-guix/bin/guix . +ln -s /var/guix/profiles/per-user/root/current-guix/bin/guix-daemon . + +guix archive --authorize < ~root/.config/guix/current/share/guix/ci.guix.gnu.org.pub +---- + +Almost all of it is taken directly from the {binary-inst}[binary installation] +section from the manual, with the interactive bits stripped out: after +downloading and extracting the Guix tarball, we create some symlinks, add +guixbuild users and authorize the `ci.guix.gnu.org.pub` signing key. + +After installing Guix, we perform a `guix pull` to update Guix inside +`start-guix.sh`: + +[source,sh] +---- +#!/usr/bin/env bash +set -x +set -Eeuo pipefail + +sudo guix-daemon --build-users-group=guixbuild & +guix pull +guix package -u +guix --version +---- + +Then we can put it all together in a sample `.build.yml` configuration file I'm +using myself: + +[source,yaml] +---- +image: debian/stable +packages: + - wget +sources: + - https://git.sr.ht/~euandreh/songbooks +tasks: + - install-guix: | + cd ./songbooks/ + ./scripts/install-guix.sh + ./scripts/start-guix.sh + echo 'sudo guix-daemon --build-users-group=guixbuild &' >> ~/.buildenv + echo 'export PATH="${HOME}/.config/guix/current/bin${PATH:+:}$PATH"' >> ~/.buildenv + - tests: | + cd ./songbooks/ + guix environment -m build-aux/guix.scm -- make check + - docs: | + cd ./songbooks/ + guix environment -m build-aux/guix.scm -- make publish-dist +---- + +We have to add the `guix-daemon` to `~/.buildenv` so it can be started on every +following task run. Also, since we used `wget` inside `install-guix.sh`, we had +to add it to the images package list. + +After the `install-guix` task, you can use Guix to build and test your project, +or run any `guix environment --ad-hoc my-package -- my script` :) + +== Improvements + +:repository: https://git.sr.ht/~sircmpwn/builds.sr.ht + +When I originally created this code I had a reason why to have both a `sudo` +call for `sudo ./scripts/install-guix.sh` and `sudo` usages inside +`install-guix.sh` itself. I couldn't figure out why (it feels like my past self +was a bit smarter 😬), but it feels ugly now. If it is truly required I could +add an explanation for it, or remove this entirely in favor of a more elegant +solution. + +I could also contribute the Guix image upstream to builds.sr.ht, but there +wasn't any build or smoke tests in the original {repository}[repository], so I +wasn't inclined to make something that just ``works on my machine'' or add a +maintainence burden to the author. I didn't look at it again recently, though. diff --git a/src/content/en/blog/2020/08/31/database-i-wish-i-had.adoc b/src/content/en/blog/2020/08/31/database-i-wish-i-had.adoc new file mode 100644 index 0000000..7f010b9 --- /dev/null +++ b/src/content/en/blog/2020/08/31/database-i-wish-i-had.adoc @@ -0,0 +1,299 @@ += The database I wish I had +:categories: mediator +:updatedat: 2020-09-03 + +:empty: +:values-talk: https://vimeo.com/230142234 +:haskell-startup: https://www.youtube.com/watch?v=ZR3Jirqk6W8 + +I watched the talk "{values-talk}[Platform as a Reflection of Values: Joyent, +Node.js and beyond]" by Bryan Cantrill, and I think he was able to put into +words something I already felt for some time: if there's no piece of software +out there that reflects your values, it's time for you to build that +software{empty}footnote:talk-time[ + At the very end, at time 29:49. When talking about the draft of this article + with a friend, he noted that Bryan O'Sullivan (a different Bryan) says a + similar thing on his talk "{haskell-startup}[Running a startup on Haskell]", + at time 4:15. +]. + +I kind of agree with what he said, because this is already happening to me. I +long for a database with a certain set of values, and for a few years I was just +waiting for someone to finally write it. After watching his talk, Bryan is +saying to me: "time to stop waiting, and start writing it yourself". + +So let me try to give an overview of such database, and go over its values. + +== Overview + +I want a database that allows me to create decentralized client-side +applications that can sync data. + +The best one-line description I can give right now is: + +____ +It's sort of like PouchDB, Git, Datomic, SQLite and Mentat. +____ + +A more descriptive version could be: + +____ +An embedded, immutable, syncable relational database. +____ + +Let's go over what I mean by each of those aspects one by one. + +=== Embedded + +:sqlite: https://sqlite.org/index.html +:sqlite-whentouse: https://sqlite.org/whentouse.html +:pouchdb: https://pouchdb.com/ +:couchdb: https://couchdb.apache.org/ +:mentat: https://github.com/mozilla/mentat +:pouchdb-adapters: https://pouchdb.com/adapters.html +:datomic-storage-services: https://docs.datomic.com/on-prem/storage.html +:sqlite-amalgamation: https://www.sqlite.org/amalgamation.html +:pointed-out: https://news.ycombinator.com/item?id=24338881 + +I think the server-side database landscape is diverse and mature enough for my +needs (even though I end up choosing SQLite most of the time), and what I'm +after is a database to be embedded on client-side applications itself, be it +desktop, browser, mobile, _etc._ + +The purpose of such database is not to keep some local cache of data in case of +lost connectivity: we have good solutions for that already. It should serve as +the source of truth, and allow the application to work on top of it. + +{sqlite}[*SQLite*] is a great example of that: it is a very powerful relational +database that runs {sqlite-whentouse}[almost anywhere]. What I miss from it +that SQLite doesn't provide is the ability to run it on the browser: even though +you could compile it to WebAssembly, [line-through]#it assumes a POSIX +filesystem that would have to be +emulated#{empty}footnote:posix-sqlite[ + It was {pointed-out}[pointed out to me] that SQLite doesn't assume the + existence of a POSIX filesystem, as I wrongly stated. Thanks for the + correction. +pass:[</p><p>] + This makes me consider it as a storage backend all by itself. I initially + considered having an SQLite storage backend as one implementation of the POSIX + filesystem storage API that I mentioned. My goal was to rely on it so I could + validate the correctness of the actual implementation, given SQLite's + robustness. +pass:[</p><p>] + However it may even better to just use SQLite, and get an ACID backend without + recreating a big part of SQLite from scratch. In fact, both Datomic and + PouchDB didn't create an storage backend for themselves, they just plugged on + what already existed and already worked. I'm beginning to think that it would + be wiser to just do the same, and drop entirely the from scratch + implementation that I mentioned. +pass:[</p><p>] + That's not to say that adding an IndexedDB compatibility layer to SQLite would + be enough to make it fit the other requirements I mention on this page. SQLite + still is an implementation of a update-in-place, SQL, table-oriented database. + It is probably true that cherry-picking the relevant parts of SQLite (like + storage access, consistency, crash recovery, parser generator, *etc.*) and + leaving out the unwanted parts (SQL, tables, threading, *etc.*) would be + better than including the full SQLite stack, that's simply an optimization. + Both could even coexist, if desired. +pass:[</p><p>] + SQLite would have to be treated similarly to how Datomic treats SQL databases: + instead of having a table for each entities, spread attributes over the + tables, *etc.*, it treats SQL databases as a key-value storage so it doesn't + have to re-implement interacting with the disk that other databases do well. +pass:[</p><p>] + The tables would contain blocks of binary data, so there isn't a difference on + how the SQLite storage backend behaves and how the IndexedDB storage backend + behaves, much like how Datomic works the same regardless of the storage + backend, same for PouchDB. +pass:[</p><p>] + I welcome corrections on what I said above, too. +]. + +{pouchdb}[*PouchDB*] is another great example: it's a full reimplementation of +{couchdb}[CouchDB] that targets JavaScript environments, mainly the browser and +Node.js. However I want a tool that can be deployed anywhere, and not limit its +applications to places that already have a JavaScript runtime environment, or +force the developer to bundle a JavaScript runtime environment with their +application. This is true for GTK+ applications, command line programs, Android +apps, _etc._ + +{mentat}[*Mentat*] was an interesting project, but its reliance on SQLite makes +it inherit most of the downsides (and benefits too) of SQLite itself. + +Having such a requirement imposes a different approach to storage: we have to +decouple the knowledge about the intricacies of storage from the usage of +storage itself, so that a module (say query processing) can access storage +through an API without needing to know about its implementation. This allows +the database to target a POSIX filesystems storage API and an IndexedDB storage +API, and make the rest of the code agnostic about storage. PouchDB has such +mechanism (called {pouchdb-adapters}[adapters]) and Datomic has them too (called +{datomic-storage-services}[storage services]). + +This would allow the database to adapt to where it is embedded: when targeting +the browser the IndexedDB storage API would provide the persistence layer that +the database requires, and similarly the POSIX filesystem storage API would +provide the persistence layer when targeting POSIX systems (like desktops, +mobile, _etc._). + +But there's also an extra restriction that comes from by being embedded: it +needs to provide and embeddable artifact, most likely a binary library object +that exposes a C compatible FFI, similar to {sqlite-amalgamation}[how SQLite +does]. Bundling a full runtime environment is possible, but doesn't make it a +compelling solution for embedding. This rules out most languages, and leaves +us with C, Rust, Zig, and similar options that can target POSIX systems and +WebAssembly. + +=== Immutable + +:datomic: https://www.datomic.com/ +:day-of-datomic: https://vimeo.com/116315075 +:git: https://git-scm.com/ +:sqlite-limits: https://sqlite.org/limits.html +:datomic-no-history: https://docs.datomic.com/cloud/best.html#nohistory-for-high-churn + +Being immutable means that only new information is added, no in-place update +ever happens, and nothing is ever deleted. + +Having an immutable database presents us with similar trade-offs found in +persistent data structures, like lack of coordination when doing reads, caches +being always coherent, and more usage of space. + +{datomic}[*Datomic*] is the go to database example of this: it will only add +information (datoms) and allows you to query them in a multitude of ways. +Stuart Halloway calls it "accumulate-only" over +"append-only"{empty}footnote:accumulate-only[ + Video "{day-of-datomic}[Day of Datomic Part 2]" on Datomic's information + model, at time 12:28. +]: + +____ +It's accumulate-only, it is not append-only. So append-only, most people when +they say that they're implying something physical about what happens. +____ + +Also a database can be append-only and overwrite existing information with new +information, by doing clean-ups of "stale" data. I prefer to adopt the +"accumulate-only" naming and approach. + +{git}[*Git*] is another example of this: new commits are always added on top of +the previous data, and it grows by adding commits instead of replacing existing +ones. + +Git repositories can only grow in size, and that is not only an acceptable +condition, but also one of the reasons to use it. + +All this means that no in-place updates happens on data, and the database will +be much more concerned about how compact and efficiently it stores data than how +fast it does writes to disk. Being embedded, the storage limitation is either +a) how much storage the device has or b) how much storage was designed for the +application to consume. So even though the database could theoretically operate +with hundreds of TBs, a browser page or mobile application wouldn't have access +to this amount of storage. SQLite even {sqlite-limits}[says] that it does +support approximately 280 TBs of data, but those limits are untested. + +The upside of keeping everything is that you can have historical views of your +data, which is very powerful. This also means that applications should turn +this off when not +relevant{empty}footnote:no-history[ + Similar to {datomic-no-history}[Datomic's `:db/noHistory`]. +]. + +=== Syncable + +:3-way-merge: https://en.wikipedia.org/wiki/Merge_(version_control) +:git-remote-gcrypt: https://spwhitton.name/tech/code/git-remote-gcrypt/ + +This is a frequent topic when talking about offline-first solutions. When +building applications that: + +* can fully work offline, +* stores data, +* propagates that data to other application instances, + +then you'll need a conflict resolution strategy to handle all the situations +where different application instances disagree. Those application instances +could be a desktop and a browser version of the same application, or the same +mobile app in different devices. + +A three-way merge seems to be the best approach, on top of which you could add +application specific conflict resolution functions, like: + +* pick the change with higher timestamp; +* if one change is a delete, pick it; +* present the diff on the screen and allow the user to merge them. + +Some databases try to make this "easy", by choosing a strategy for you, but I've +found that different applications require different conflict resolution +strategies. Instead, the database should leave this up to the user to decide, +and provide tools for them to do it. + +{3-way-merge}[*Three-way merges in version control*] are the best example, +performing automatic merges when possible and asking the user to resolve +conflicts when they appear. + +The unit of conflict for a version control system is a line of text. The +database equivalent would probably be a single attribute, not a full entity or a +full row. + +Making all the conflict resolution logic be local should allow the database to +have encrypted remotes similar to how {git-remote-gcrypt}[git-remote-gcrypt] +adds this functionality to Git. This would enable users to sync the application +data across devices using an untrusted intermediary. + +=== Relational + +:datomic-datalog: https://docs.datomic.com/on-prem/query.html +:datomic-model: https://docs.datomic.com/cloud/whatis/data-model.html#datoms + +I want the power of relational queries on the client applications. + +Most of the arguments against traditional table-oriented relational databases +are related to write performance, but those don't apply here. The bottlenecks +for client applications usually aren't write throughput. Nobody is interested +in differentiating between 1 MB/s or 10 MB/s when you're limited to 500 MB +total. + +The relational model of the database could either be based on SQL and tables +like in SQLite, or maybe {datomic-datalog}[datalog] and {datomic-model}[datoms] +like in Datomic. + +== From aspects to values + +Now let's try to translate the aspects above into values, as suggested by Bryan +Cantrill. + +=== Portability + +Being able to target so many different platforms is a bold goal, and the +embedded nature of the database demands portability to be a core value. + +=== Integrity + +When the local database becomes the source of truth of the application, it must +provide consistency guarantees that enables applications to rely on it. + +=== Expressiveness + +The database should empower applications to slice and dice the data in any way +it wants to. + +== Next steps + +Since I can't find any database that fits these requirements, I've finally come +to terms with doing it myself. + +It's probably going to take me a few years to do it, and making it portable +between POSIX and IndexedDB will probably be the biggest challenge. I got +myself a few books on databases to start. + +I wonder if I'll ever be able to get this done. + +== External links + +:reddit: https://old.reddit.com/r/programming/comments/ijwz5b/the_database_i_wish_i_had/ +:lobsters: https://lobste.rs/s/m9vkg4/database_i_wish_i_had +:hn: https://news.ycombinator.com/item?id=24337244 +:list: https://lists.sr.ht/~euandreh/public-inbox/%3C010101744a592b75-1dce9281-f0b8-4226-9d50-fd2c7901fa72-000000%40us-west-2.amazonses.com%3E + +See discussions on {reddit}[Reddit], {lobsters}[lobsters], {hn}[HN] and {list}[a +lengthy email exchange]. |